Sign up for a free GitHub account to open an issue and contact its maintainers and the community. Asking for help, clarification, or responding to other answers. After searching found out setting environment path will fix the problem but still it gives same error. Reddit and its partners use cookies and similar technologies to provide you with a better experience. In general relativity, why is Earth able to accelerate? What does "Welcome to SeaWorld, kid!" rev2023.6.2.43474. FROM alpine:3.4 RUN echo "http://dl-8.alpinelinux.org/alpine/edge/community" >> /etc/apk/repositories command: /srv/conda/envs/notebook/bin/python3.7 -c import sys, setuptools, tokenize; sys.argv[0] = ""/tmp/pip-install-u56n8zts/Cartopy/setup.py""; file=""/tmp/pip-install-u56n8zts/Cartopy/setup.py"";f=getattr(tokenize, ""open"", open)(file);code=f.read().replace(""\r\n"", ""\n"");f.close();exec(compile(code, file, ""exec"")) egg_info --egg-base /tmp/pip-pip-egg-info-h_3_nj6e By clicking Accept all cookies, you agree Stack Exchange can store cookies on your device and disclose information in accordance with our Cookie Policy. Contribute to DataForScience/Epidemiology101 development by creating an account on GitHub. Removing intermediate container c697955c23c4 62e60f3ef11e: Pull complete To review, open the file in an editor that reveals hidden Unicode characters. Seems issue with the location of the file try to give absolute path of the file that you are referring in dockerfile. The command '/bin/sh -c pip install -r requirements.txt' returned a non-zero code: 1. Does the policy change for AI-generated content affect users who (want to) Dockerfile error: /bin/sh: 1: [python,: not found, No such file or directory while running docker, The command returned a non-zero code: 127. Thanks for contributing an answer to Stack Overflow! See https://pythonspeed.com/articles/alpine-docker-python/ for my choice to start from python:slim. apk add proj-util; standard_init_linux.go:187: exec user process caused "exec format error" To subscribe to this RSS feed, copy and paste this URL into your RSS reader. numpy==1.14.3 But even though, py3-numpy installs libraries into /usr/lib/python3.7/site-packagesdirectory but default Python module path does not use it : I fixed the problem by settings $PYTHONPATH environment variable to /usr/liblocated site packages : EDIT: you might also need to install py-numpy-dev to get Numpy C headers required by other Python compiled libraries. works but pip install -r requirements.txt does not work, Running pip install requirements.txt fails in docker build, docker pip install not working with requirements file, Docker-compose, pip install -r requirements.txt' returned a non-zero code: 1, Dockerfile: pip install fails with requirements.txt (but succeeds with individual packages), Pip3 is unable to install requirements.txt during docker build, dockerfile pip install -r requirements.txt giving file not found error. How to troubleshoot crashes detected by Google Play Store for Flutter app, Cupertino DateTime picker interfering with scroll behaviour. How can I manually analyse this simple BJT circuit? Dockerfile ADD failed : No Source files were specified, 'RUN pip install -r requirements.txt' not working, The ADD command you use creates a file called. apk add --no-cache python3-dev py3-pip alpine-sdk postgresql-dev postgresql; The command /bin/sh -c ${KERNEL_PYTHON_PREFIX}/bin/pip install --no-cache-dir -r requirements.txt returned a non-zero code: 1. cartopy is the last line in my requirements.txt so everything else should already be available at that point. From the logs I can see that numpy was already installed, so it wasnt just a matter of installation order. Connect and share knowledge within a single location that is structured and easy to search. RUN python -m pip install numpy. . Already on GitHub? Learn more about bidirectional Unicode characters, https://pythonspeed.com/articles/alpine-docker-python/, http://dl-8.alpinelinux.org/alpine/edge/community, install numpy version < 1.14.4 so 1.14.3 is fine, install python-dateutil (which is a pandas dependency), install pandas without dependencies by running pip install --no-deps pandas==0.23.0. ERROR: Command errored out with exit status 1: /usr/bin/python3 /usr/lib/python3.8/site-packages/pep517/_in_process.py prepare_metadata_for_build_wheel /tmp/tmp9m_79xyv Check the logs for full command output. Can I trust my bikes frame after I was hit by a car if there's no visible cracking? The RUN commands can be reordered for better cache efficiency. Sound for when duct tape is being pulled off of a roll. privacy statement. EXPOSE 8000 Can you explain that, why ? Don't put each shell command in a separate RUN. gcc is likely not needed as build-base depends on it. Step 1/10 : FROM python:slim The text was updated successfully, but these errors were encountered: I can't reproduce this since I don't have a Raspberry Pi. How can an accidental cat scratch break skin but not damage clothes? rev2023.6.2.43474. I was check my requirements.txt, On the docker document just add python and Redis, i tried to improv and i was add scrapy in requirements.txt. I am new to Docker and trying to deploy a django project with the same. After i delete scrapy, it's working. Load . Sign in Thank you so much. cython By clicking Accept all cookies, you agree Stack Exchange can store cookies on your device and disclose information in accordance with our Cookie Policy. That, combined with the fact that they dont provide pre-built wheels (again, probably very hard to do, given dependencies), essentially means that it is not pip-installable without substantial manual pre-install steps. Browse other questions tagged, Where developers & technologists share private knowledge with coworkers, Reach developers & technologists worldwide, Attach to the container manually and run the same command. @bkarpe Basically Docker failed when trying to process the Docker file. Flutter change focus color and icon color but not works. In the same folder with Dockerfile and app.py. non-zero code: 1, I might be messing up in setting the correct path so here is my project structure, Upgrading PIP: How to Upgrade PIP in Windows by Few Steps, How to install Python 3.9.2 and PIP on Windows 10, How to Install requests module in Python 3 on Windows 10/8/7, How to Install Pip packages using PyCharm ? ea222f757df7: Pull complete and our To learn more, see our tips on writing great answers. Connect and share knowledge within a single location that is structured and easy to search. I dont know about conda but pip doesnt respect package order in requirements.txt when deciding what order to install stuff in. Diagonalizing selfadjoint operator on core domain, Monitoring the waveform of a low frequency squarewave, built into unit, with bnc output to scope, Theoretical Approaches to crack large files encrypted with AES. import numpy as np six==1.14.0 privacy statement. Can anyone give your experience? My father is ill and booked a flight to see him - can I travel on my other passport? #11 5.252 required by: world[python-dev], executor failed running [/bin/sh -c apk --no-cache --update-cache add gcc gfortran python python-dev py-pip build-base wget freetype-dev libpng-dev openblas-dev]: exit code: 2, I am getting error like this pls can anyone help me out, Installing numpy, scipy, pandas and matplotlib in Alpine (Docker). Should convert 'k' and 't' sounds to 'g' and 'd' sounds when they follow 's' in a word for pronunciation? #11 5.252 python-dev (no such package): directory: 'requirements.txt' ERROR: Service 'web' failed to build: Cartoon series about a world-saving agent, who is an Indiana Jones and James Bond mixture. I tried using both alpine:latest image and python:slim image, both throws an error: Is there a reliable way to check if a trigger being fired was the result of a DML action from another *specific* trigger? 3 comments shahidkarimi on Feb 13, 2021 . Site design / logo 2023 Stack Exchange Inc; user contributions licensed under CC BY-SA. Docker Build Ending Up `returned a non-zero code: 1`, Building a safer community: Announcing our new Code of Conduct, Balancing a PhD program with a startup career (Ep. Better use following: #11 5.137 WARNING: Ignoring http://dl-8.alpinelinux.org/alpine/edge/community: DNS lookup error Cartoon series about a world-saving agent, who is an Indiana Jones and James Bond mixture, Sound for when duct tape is being pulled off of a roll. #11 5.252 required by: world[python] I am running this on Raspbian Jesse (Raspberry Pi 3). This is excellent. Thank you. You need to copy your code. Site design / logo 2023 Stack Exchange Inc; user contributions licensed under CC BY-SA. Noise cancels but variance sums - contradiction? how do i setup only python 2.7 in docker container? The best answers are voted up and rise to the top, Not the answer you're looking for? RUN ln -s /usr/include/locale.h /usr/include/xlocale.h The command '/bin/sh -c pip install -r requirements.txt' returned a non-zero code: 1. 8559a31e96f4: Pull complete pyproj If you have found a problem that seems similar to this, please open a new issue. Movie in which a group of friends are driven to an abandoned warehouse full of vampires. File /tmp/pip-install-u56n8zts/Cartopy/setup.py, line 43, in I would really appreciate it. I was able to build the image for now by replacing the line that upgrades pip to the latest version on the dockerfile, and installing the previous version on the list instead (20.3.4). It causes them to run in separate shells and environment variables from earlier shells don't affect later ones since every process has its own environment. Making statements based on opinion; back them up with references or personal experience. Browse other questions tagged, Start here for a quick overview of the site, Detailed answers to any questions you might have, Discuss the workings and policies of this site. Traceback (most recent call last): Can I also say: 'ich tut mir leid' instead of 'es tut mir leid'? I figured out how to make numpy package from Alpine repository to work. ERROR: Command errored out with exit status 1: Im waiting for my US passport (am a dual citizen. @JibinMathews it's giving the error ERROR: Service 'web' failed to build: Cannot mkdir: /ToDoApp/ToDoApp is not a directory. to your account, While installing via docker-compose Sign in 1 Line 81 of build.sh is trying to run python3. Status: Downloaded newer image for python:slim, chown: invalid user: appuser:appuser 0 The command returned a non-zero code: 2 docker. I tried to fix the issue with google but since I am very new in working with raspberry pi and docker I would be very thankful if anybody can help. Sign in to comment Downloading Cartopy-0.18.0.tar.gz (14.4 MB) Can the logo of TSR help identifying the production time of old Products? This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. Find centralized, trusted content and collaborate around the technologies you use most. cartopy has pretty extensive build-time dependencies and doesnt express any of them as build dependencies in setup.py (some of them, it probably cant, such as GEOS). Cookie Notice I had the same problem as you and found that pandas is still trying to install most recent version of numpy even if you already satisfied its requirement of numpy > 1.9 so I resolved it by: Also pytz>=2011k is a Pandas dependency, let's include it together with python-dateuti. DevOps Stack Exchange is a question and answer site for software engineers working on automated testing, continuous delivery, service integration and monitoring, and building SDLC infrastructure. Asking for help, clarification, or responding to other answers. Complete output (12 lines): ENV LANG=C.UTF-8 I'm trying to get to run the facerecogition from (https://github.com/jamct/facerec) on my raspberry pi 3. Docker Desktop 2.1.0.5 (40693) Engine: 19.03.5; Compose: 1.24.1; Machine: 0.16.2; Windows 10 Pro for Workstations; Dockerfile: FROM tiangolo/uvicorn-gunicorn:python3.7 COPY ./app /app RUN pip install -r /app/requirements.txt EXPOSE 80 docker network inspect for my default bridge: And yet without this step Python gives module not found error. requests==2.24.0 what does [length] after a `\\` mark mean, Recovery on an ancient version of my TexStudio file. Args need to be separated when you use the json syntax. scipy==1.3.1 Permission errors with non-root USER when running on Linux, Error during setup of clairctl for container scanning with clair, Install MDB2 in docker container while PEAR is down, Nginx routing setup within Docker container, request timing out with 502, Cant ssh into running container containing portainer through docker exec. What are good reasons to create a city/nation in which a government wouldn't let you leave. Epidemic Modeling for Everyone. to run under mybinder but it keeps crashing during the setup of Cartopy: Collecting Cartopy==0.18.0 Downloading Cartopy-.18..tar.gz (14.4 MB) More specifically it failed on the instruction RUN pip install -r requirements.txt, which fetches and installs python packages. You can also experiment with quicker build times and persistent logs by using repo2docker locally https://repo2docker.readthedocs.io If you can get it working with repo2docker, then itll work on Binder as it is the same tool that works in the background. cwd: /tmp/pip-install-u56n8zts/Cartopy/ Can you identify this fighter from the silhouette? Connect and share knowledge within a single location that is structured and easy to search. You signed in with another tab or window. I have tried setting proxy environment variables ( I might have done this wrong, I used the Server IP address with the Flask assigned port.). How could a person make a concoction smooth enough to drink and inject without access to a blender? Diagonalizing selfadjoint operator on core domain. How appropriate is it to post a tweet saying that I am looking for postdoc positions? Thanks for contributing an answer to Stack Overflow! RUN apk add py-numpy 93c8ae153782: Pull complete . More details about Python 2 support in pip can be found at https://pip.pypa.io/en/latest/development/release-process/#python-2-support pip 21.0 will remove support for this functionality.". chown appuser:appuser /app, WORKDIR /app . I have read it might be worth trying setting the DNS server to 8.8.8.8 but I wasn't exactly sure where to set that up. By the way, FROM lines don't combine. Making statements based on opinion; back them up with references or personal experience. apk add --update --no-cache py3-numpy; Powered by Discourse, best viewed with JavaScript enabled. Use relative paths and the WORKDIR correctly. Browse other questions tagged, Where developers & technologists share private knowledge with coworkers, Reach developers & technologists worldwide, This isn't a docker problem it's a python import problem, I'd amend your tags, The command '/bin/sh -c pip install -r requirements.txt' returned a non-zero code: 1, PIP (Python) : ImportError: cannot import name _remove_dead_weakref, Building a safer community: Announcing our new Code of Conduct, Balancing a PhD program with a startup career (Ep. and it tells me this is the newest version. But the problem is more fundamental because you aren't getting any of the earlier echos or apt-get command's output. Site design / logo 2023 Stack Exchange Inc; user contributions licensed under CC BY-SA. I avoided this problem by using the correct repository for docker-compose setup: https://github.com/cabotapp/docker-cabot. paho-mqtt==1.5.0 Docker error The command non-zero code: 1 python, Building a safer community: Announcing our new Code of Conduct, Balancing a PhD program with a startup career (Ep. Running ubuntu server OS in Virtual Box. Ubuntu 20.04. Find centralized, trusted content and collaborate around the technologies you use most. Is it possible? COPY /app /app my requirements.txt is in ToDoApp that's why i added it to ToDoApp/ToDoApp in my dockerfile. This helps our team focus on active issues. I think the update was in one of the C headers it needs, During the compile, it complains about some typing issues. In case you cant move to slim-buster, the natural answer to this is The command '/bin/sh -c pip install -r requirements.txt' returned a non-zero code: 1. ADD is unneeded (you're not extracting a tar or downloading from a URL) so that can switch to a COPY. Sign up for a free GitHub account to open an issue and contact its maintainers and the community. To learn more, see our tips on writing great answers. RUN pip install --no-cache-dir numpy scipy pandas matplotlib. 576), AI/ML Tool examples part 3 - Title-Drafting Assistant, We are graduating the updated button styling for vote arrows. I was check my requirements.txt, On the docker document just add python and Redis, i tried to improv and i was add scrapy in requirements.txt. And the error is : i don't know why, i follow the code from documentation but always get error. thanks, FROM tiangolo/uwsgi-nginx-flask:python3.6-alpine3.7 In Europe, do trains/buses get transported by ferries with the passengers inside? Switching to using conda instead seems to have fixed the problem. The RUN commands can be reordered for better cache efficiency. COPY --chown=appuser:appuser / /app, RUN apk add --update --no-cache python3 libpq uwsgi-python3; #11 5.252 python (no such package): Well occasionally send you account related emails. I havent really be able to find anything helpful online. With apt-get, it's a good idea to also erase apt's cache files at the end so they don't become part of the layer. Closed issues are locked after 30 days of inactivity. Why are distant planets illuminated like stars, but when approached closely (by a space telescope for example) its not illuminated? Can you identify this fighter from the silhouette? It only takes a minute to sign up. Asking for help, clarification, or responding to other answers. RUN pip install pandas, This leads to ERROR: Failed building wheel for pyarrow for me. To subscribe to this RSS feed, copy and paste this URL into your RSS reader. Extending IC sheaves across smooth normal crossing divisors. Thanks for contributing an answer to Stack Overflow! Already on GitHub? ERROR: Command "/usr/local/bin/python -u -c 'import setuptools, tokenize;file='"'"'/tmp/pip-install-2u_c2pqi/numpy/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(file);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' install --record /tmp/pip-record-gfsn5nsl/install-record.txt --single-version-externally-managed --compile" failed with error code 1 in /tmp/pip-install-2u_c2pqi/numpy/ Does substituting electrons with muons change the atomic shell configuration? Sending build context to Docker daemon 1.394MB i didn't include panda version in my requirements - i tried but it run error . What happens if you've already found the item an old map leads to? PS C:\Users\thangaraj\PycharmProjects> docker build -t grs-docker . apk add lapack-dev; Clone with Git or checkout with SVN using the repositorys web address. Even the last known version that was working 1.14.2. I do not believe the Windows Box has a proxy set because I ran: netsh winhttp show proxy and it says Direct access (no proxy server). Are you running out of memory on the docker whilst they are installing? I think this is due to pip dropping support for python2, see here. to your account, File: get-started/part2.md, CC @johndmulhausen, I got the following error: In July 2022, did China have more nuclear weapons than Domino's Pizza locations? Remember, Docker images are self-contained bundles. Alternatively you could use temporary assignment syntax to set the variable and call pip in one command: Split RUN statements create unnecessary extra layers which leads to overly large images. Actually py-numpy does not really install bumpy but py3-numpy does. Contribute to DataForScience/Epidemiology101 development by creating an account on GitHub. Is there any philosophical theory behind the concept of object in computer science? So how do you tell Python that the package was already installed via linux package manager? Making statements based on opinion; back them up with references or personal experience. Is there any philosophical theory behind the concept of object in computer science? The python:2 image already has an OS layer underneath. to run under mybinder but it keeps crashing during the setup of Cartopy: Collecting Cartopy==0.18.0 Could anyone help/ advice me with these errors? How could a person make a concoction smooth enough to drink and inject without access to a blender? Download ZIP Installing numpy, scipy, pandas and matplotlib in Alpine (Docker) Raw Dockerfile # Below are the dependencies required for installing the common combination of numpy, scipy, pandas and matplotlib # in an Alpine based Docker image. Have a question about this project? rev2023.6.2.43474. Thanks - this is a great option for my use case. This isn't working.. pip3 install --no-cache-dir --upgrade pip ; https://github.com/austinsonger/GreenOpenVAS. statistics==1.0.3.5 The text was updated successfully, but these errors were encountered: All reactions. Is Spider-Man the only Marvel character that has been represented as multiple non-human characters? Is there any evidence suggesting or refuting that Russian officials knowingly lied that Russia was not going to attack Ukraine? Why doesnt SpaceX sell Raptor engines commercially? If anybody needs the full log: https://www.codepile.net/pile/P4xNWyoe (hope it works, never used it). What maths knowledge is required for a lab-based (molecular and cell biology) PhD? Service 'beat' failed to build : The command '/bin/sh -c pip install --no-cache-dir -r requirements.txt' returned a non-zero code: 1, https://pip.pypa.io/en/latest/development/release-process/#python-2-support. Find centralized, trusted content and collaborate around the technologies you use most. 4 docker build: Returned a non-zero code: 5. ENV PYTHONPATH=/usr/lib/python3.7/site-packages, RUN addgroup -S appuser ; adduser -S appuser -G appuser -h /app ; Getting requirements to build wheel: started Why does awk -F work for most letters, but not for the letter "t"? Critical issues have been reported with the following SDK versions: com.google.android.gms:play-services-safetynet:17.0.0, Flutter Dart - get localized country name from country code, navigatorState is null when using pushNamed Navigation onGenerateRoutes of GetMaterialPage, Android Sdk manager not found- Flutter doctor error, Flutter Laravel Push Notification without using any third party like(firebase,onesignal..etc), How to change the color of ElevatedButton when entering text in TextField, Command "python setup.py egg_info" failed with error code 1 in /tmp/pip-install-xtrlkujj/pyaudio/. matplotlib, Console Output: Instantly share code, notes, and snippets. Im still tarting to wrap my head around mybinder and wasnt aware of the differences between pip and conda environments. Can I infer that Schrdinger's cat is dead without opening the box, if I wait a thousand years? I will check for a possible conflict here. Another way to force the package install order is to create the Binder environment using a Dockerfile, installing your must-do-this-first package explicitly before the more general install from a full requirements/environment file. By clicking Post Your Answer, you agree to our terms of service and acknowledge that you have read and understand our privacy policy and code of conduct. The command '/bin/sh -c sudo pip3 install -r requirements.txt' returned a non-zero code: 1, Docker error The command non-zero code: 1 python, 'RUN pip install -r requirements.txt' not working, Docker: pip install -e . Standard practice in Dockerfiles is to merge related RUNs into one large command with backslashes. How can I shave a sheet of plywood into a wedge shim? The command '/bin/sh -c apk add --update --no-cache python3 libpq uwsgi-python3; apk add --no-cache python3-dev py3-pip alpine-sdk postgresql-dev postgresql; apk add --update --no-cache py3-numpy; apk add libgfortran; apk add In Europe, do trains/buses get transported by ferries with the passengers inside? Why Is PNG file with Drop Shadow in Flutter Web App Grainy? I have a Windows Server 2016 Box that I am trying to use to build Docker EE Windows containers that deploy a Python Flask application. You signed in with another tab or window. But if that were the case you would get something like. not an exec format error. Can the logo of TSR help identifying the production time of old Products? In the next step install it with pip. pip install numpy fails tries to install it normally. I would try: Thanks for contributing an answer to DevOps Stack Exchange! When you pull in python:2 you get not just the Python interpreter but also all of its dependencies. RUN echo "http://dl-8.alpinelinux.org/alpine/edge/community" >> /etc/apk/repositories . Sending build context to Docker daemon 252.7MB Step 1/8 : FROM python:3.8 ---> d070676dfed8 Step 2/8 : WORKDIR /app ---> Using cache ---> f02733df8e5f Step 3/8 : COPY . Is it possible? Have a question about this project? This was working until about yesterday. ENV LISTEN_PORT=8000 rather than "Gaudeamus igitur, *dum iuvenes* sumus!"? apk add libgfortran; 576), AI/ML Tool examples part 3 - Title-Drafting Assistant, We are graduating the updated button styling for vote arrows. 1)alpine:latest The command '/bin/sh -c pip install -r requirements.txt' returned a By clicking Accept all cookies, you agree Stack Exchange can store cookies on your device and disclose information in accordance with our Cookie Policy. Theoretical Approaches to crack large files encrypted with AES. Reddit, Inc. 2023. The command pip install -r requirements.txt fails as it can not find the module Cython Can you explain that, why ? e97d3933bbbe: Pull complete Args need to be separated when you use the json syntax. If I seperately RUN, The command ' xx ' returned a non-zero code: 1, picamera.readthedocs.io/en/release-1.12/install.html, Building a safer community: Announcing our new Code of Conduct, Balancing a PhD program with a startup career (Ep. Site design / logo 2023 Stack Exchange Inc; user contributions licensed under CC BY-SA. By clicking Sign up for GitHub, you agree to our terms of service and Ill start using it to test things locally. Already have an account? Thanks in advance. Not the answer you're looking for? How can an accidental cat scratch break skin but not damage clothes? nity/x86_64/APKINDEX.tar.gz The command '/bin/sh -c sudo pip3 install -r requirements.txt' returned a non-zero code: 1, The command '/bin/sh returned a non-zero code: 1, Docker error The command non-zero code: 1 python, The command returned a non-zero code: 127, The command '/bin/sh -c pip install -r requirements.txt' returned a non-zero code: 1, docker build: Returned a non-zero code: 5, Docker: The command returned a non-zero code: 137, The command returned a non-zero code: 2 docker, Where developers & technologists share private knowledge with coworkers, Reach developers & technologists worldwide. Should I trust my own thoughts when studying philosophy? Install and using pip and virtualenv in Docker, "ModuleNotFoundError: No module named
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